STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101062014ADAM metallopeptidase domain 15. (913 aa)    
Predicted Functional Partners:
LOC101073075
Anion exchange protein.
      
 0.535
sepsecs
LRRCT domain-containing protein.
     
 0.444
LOC101080029
Matrix metallopeptidase 25b.
     
 0.425
SLC9A3R2
SLC9A3 regulator 2.
    
 
 0.413
slc9a3r2
Uncharacterized protein.
    
 
 0.413
LOC101076805
Somatostatin receptor 1b; Belongs to the G-protein coupled receptor 1 family.
  
  
  0.403
plpp3
Phospholipid phosphatase 3.
      
 0.402
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.