tor2a protein (Takifugu rubripes) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

tor2a

Torsin family 2, member A. (311 aa)

Predicted Functional Partners:

LOC101078376

0.700

LOC101078830

0.700

LOC101078600

0.700

LOC101078265

0.651

ENSTRUP00000075566

0.651

pam

0.647

LOC101072984

0.620

LOC101063439

0.619

LOC101077703

0.619

rnf170

0.618

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSTRUP00000075566	LOC101078376	ENSTRUP00000075566	ENSTRUP00000047418	Uncharacterized protein.	Torsin family 1.	0.604
ENSTRUP00000075566	LOC101078600	ENSTRUP00000075566	ENSTRUP00000080914	Uncharacterized protein.	Torsin.	0.604
ENSTRUP00000075566	LOC101078830	ENSTRUP00000075566	ENSTRUP00000048627	Uncharacterized protein.	Torsin.	0.604
ENSTRUP00000075566	tor2a	ENSTRUP00000075566	ENSTRUP00000024142	Uncharacterized protein.	Torsin family 2, member A.	0.651
LOC101063439	LOC101077703	ENSTRUP00000034252	ENSTRUP00000066616	Gastrin domain-containing protein.	Cholecystokinin a.	0.906
LOC101063439	tor2a	ENSTRUP00000034252	ENSTRUP00000024142	Gastrin domain-containing protein.	Torsin family 2, member A.	0.619
LOC101072984	LOC101078600	ENSTRUP00000084295	ENSTRUP00000080914	Cortistatin.	Torsin.	0.456
LOC101072984	LOC101078830	ENSTRUP00000084295	ENSTRUP00000048627	Cortistatin.	Torsin.	0.456
LOC101072984	tor2a	ENSTRUP00000084295	ENSTRUP00000024142	Cortistatin.	Torsin family 2, member A.	0.620
LOC101077703	LOC101063439	ENSTRUP00000066616	ENSTRUP00000034252	Cholecystokinin a.	Gastrin domain-containing protein.	0.906
LOC101077703	tor2a	ENSTRUP00000066616	ENSTRUP00000024142	Cholecystokinin a.	Torsin family 2, member A.	0.619
LOC101078265	LOC101078376	ENSTRUP00000056207	ENSTRUP00000047418	Uncharacterized protein.	Torsin family 1.	0.604
LOC101078265	LOC101078600	ENSTRUP00000056207	ENSTRUP00000080914	Uncharacterized protein.	Torsin.	0.604
LOC101078265	LOC101078830	ENSTRUP00000056207	ENSTRUP00000048627	Uncharacterized protein.	Torsin.	0.604
LOC101078265	tor2a	ENSTRUP00000056207	ENSTRUP00000024142	Uncharacterized protein.	Torsin family 2, member A.	0.651
LOC101078376	ENSTRUP00000075566	ENSTRUP00000047418	ENSTRUP00000075566	Torsin family 1.	Uncharacterized protein.	0.604
LOC101078376	LOC101078265	ENSTRUP00000047418	ENSTRUP00000056207	Torsin family 1.	Uncharacterized protein.	0.604
LOC101078376	tor2a	ENSTRUP00000047418	ENSTRUP00000024142	Torsin family 1.	Torsin family 2, member A.	0.700
LOC101078600	ENSTRUP00000075566	ENSTRUP00000080914	ENSTRUP00000075566	Torsin.	Uncharacterized protein.	0.604
LOC101078600	LOC101072984	ENSTRUP00000080914	ENSTRUP00000084295	Torsin.	Cortistatin.	0.456