STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101066276Kruppel-like factor 5 like. (438 aa)    
Predicted Functional Partners:
LOC101062898
CCAAT enhancer binding protein beta.
    
 0.620
LOC101070643
E1A binding protein p300 a.
    
 0.616
ENSTRUP00000064066
E1A binding protein p300 b.
    
 0.616
LOC115248448
E1A binding protein p300 b.
    
 0.616
cebpd
CCAAT/enhancer-binding protein.
    
 0.567
wwp2
E3 ubiquitin-protein ligase.
    
 0.548
ENSTRUP00000070181
annotation not available
    
 0.548
LOC101068611
WW domain containing E3 ubiquitin protein ligase 1.
    
 0.548
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.516
LOC101073984
CREB binding protein a.
    
 0.514
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.