Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
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[Homology]
Score
B3GALT2Hexosyltransferase. (419 aa)    
Predicted Functional Partners:
LOC101075953
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3.
   
 
 0.943
b4galt2
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2.
   
 
 0.912
b4galt4
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4.
   
 
 0.912
LOC101076002
Si:dkey-199f5.8.
   
 
 0.912
st3gal4
ST3 beta-galactoside alpha-2,3-sialyltransferase 4; Belongs to the glycosyltransferase 29 family.
     
 0.910
LOC101067076
Hexosyltransferase.
  
  
 
0.904
LOC101066739
Hexosyltransferase.
     
 
0.900
shcbp1
SHC SH2-domain binding protein 1.
      
 0.744
spg21
SPG21 abhydrolase domain containing, maspardin.
      
 0.744
LOC101066088
DP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1, like.
   
 
 0.692
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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