STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ptgr2Prostaglandin reductase 2. (351 aa)    
Predicted Functional Partners:
LOC105417439
Zgc:56585; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.937
hpgd
15-hydroxyprostaglandin dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.937
LOC101079237
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.937
ZADH2
Zinc binding alcohol dehydrogenase domain containing 2.
  
0.925
ptgr1
Prostaglandin reductase 1.
  
  
 
0.910
ASS1
Argininosuccinate synthase 1.
    
   0.641
TP53I3
Tumor protein p53 inducible protein 3.
  
 
 0.545
LOC101074759
Alpha-L-fucosidase 2.
      
 0.518
mmachc
Metabolism of cobalamin associated C.
   
 
 0.504
LOC101072252
Zgc:56622.
   
 
 0.503
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.