STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nipa1NIPA magnesium transporter 1. (304 aa)    
Predicted Functional Partners:
cyfip1
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
   
  
 0.849
tubgcp5
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
   
  
 0.844
slc30a1
Uncharacterized protein.
      
 0.687
spart
Spartin b.
   
  
 0.575
igfbp2
Insulin-like growth factor binding protein 2a.
      
 0.566
reep1-2
Receptor expression-enhancing protein.
      
 0.566
atl1
Atlastin GTPase 1.
      
 0.566
washc5
WASH complex subunit 5.
      
 0.557
spast
Spastin; Belongs to the AAA ATPase family.
      
 0.543
baz1b
Bromodomain adjacent to zinc finger domain, 1B.
      
 0.540
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.