catip protein (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Co-expression

Experiments

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[Homology]

Score

catip

Uncharacterized protein. (380 aa)

Predicted Functional Partners:

tpgs1

0.891

fbxl13

0.729

Dnah3

0.682

ENSTRUP00000057600

0.682

ropn1l

0.662

fopnl

0.659

zfand2a

0.652

cfap299

0.643

nhej1

0.641

ENSTRUP00000053191

0.633

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Dnah3	ENSTRUP00000053191	ENSTRUP00000001207	ENSTRUP00000053191	Uncharacterized protein.	Uncharacterized protein.	0.746
Dnah3	catip	ENSTRUP00000001207	ENSTRUP00000024271	Uncharacterized protein.	Uncharacterized protein.	0.682
Dnah3	cfap299	ENSTRUP00000001207	ENSTRUP00000055269	Uncharacterized protein.	Cilia and flagella associated protein 299.	0.649
Dnah3	ropn1l	ENSTRUP00000001207	ENSTRUP00000004078	Uncharacterized protein.	Rhophilin associated tail protein 1-like.	0.444
ENSTRUP00000053191	Dnah3	ENSTRUP00000053191	ENSTRUP00000001207	Uncharacterized protein.	Uncharacterized protein.	0.746
ENSTRUP00000053191	ENSTRUP00000057600	ENSTRUP00000053191	ENSTRUP00000057600	Uncharacterized protein.	Uncharacterized protein.	0.746
ENSTRUP00000053191	catip	ENSTRUP00000053191	ENSTRUP00000024271	Uncharacterized protein.	Uncharacterized protein.	0.633
ENSTRUP00000053191	cfap299	ENSTRUP00000053191	ENSTRUP00000055269	Uncharacterized protein.	Cilia and flagella associated protein 299.	0.647
ENSTRUP00000053191	fbxl13	ENSTRUP00000053191	ENSTRUP00000029048	Uncharacterized protein.	F-box and leucine-rich repeat protein 13.	0.655
ENSTRUP00000057600	ENSTRUP00000053191	ENSTRUP00000057600	ENSTRUP00000053191	Uncharacterized protein.	Uncharacterized protein.	0.746
ENSTRUP00000057600	catip	ENSTRUP00000057600	ENSTRUP00000024271	Uncharacterized protein.	Uncharacterized protein.	0.682
ENSTRUP00000057600	cfap299	ENSTRUP00000057600	ENSTRUP00000055269	Uncharacterized protein.	Cilia and flagella associated protein 299.	0.580
ENSTRUP00000057600	ropn1l	ENSTRUP00000057600	ENSTRUP00000004078	Uncharacterized protein.	Rhophilin associated tail protein 1-like.	0.444
catip	Dnah3	ENSTRUP00000024271	ENSTRUP00000001207	Uncharacterized protein.	Uncharacterized protein.	0.682
catip	ENSTRUP00000053191	ENSTRUP00000024271	ENSTRUP00000053191	Uncharacterized protein.	Uncharacterized protein.	0.633
catip	ENSTRUP00000057600	ENSTRUP00000024271	ENSTRUP00000057600	Uncharacterized protein.	Uncharacterized protein.	0.682
catip	cfap299	ENSTRUP00000024271	ENSTRUP00000055269	Uncharacterized protein.	Cilia and flagella associated protein 299.	0.643
catip	fbxl13	ENSTRUP00000024271	ENSTRUP00000029048	Uncharacterized protein.	F-box and leucine-rich repeat protein 13.	0.729
catip	fopnl	ENSTRUP00000024271	ENSTRUP00000029038	Uncharacterized protein.	Fgfr1op N-terminal like.	0.659
catip	nhej1	ENSTRUP00000024271	ENSTRUP00000051062	Uncharacterized protein.	Nonhomologous end-joining factor 1.	0.641