STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mcts1Malignant T-cell-amplified sequence. (181 aa)    
Predicted Functional Partners:
denr
Density-regulated protein; Belongs to the DENR family.
   
 
 0.991
LOC101073775
Eukaryotic translation initiation factor 1B.
   
 
 0.778
sbds
SBDS ribosome maturation factor.
   
 
 0.756
eif2d
Eukaryotic translation initiation factor 2D.
    
 
 0.725
gtf2e1
General transcription factor IIE, polypeptide 1, alpha.
    
   0.642
H2TER7_TAKRU
Ribosomal protein S28.
   
   0.629
otud6b
OTU domain-containing protein.
    
 
 0.622
RPS20
Ribosomal protein S20.
   
   0.604
LOC101069523
40S ribosomal protein S20.
   
   0.604
c21h9orf64
Queuosine salvage protein; Involved in salvaging queuosine.
 
      0.585
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.