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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mcts1Malignant T-cell-amplified sequence. (181 aa)    
Predicted Functional Partners:
denr
Density-regulated protein; Belongs to the DENR family.
   
 
 0.991
LOC101073775
Eukaryotic translation initiation factor 1B.
   
 
 0.940
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 
 0.896
H2TER7_TAKRU
Ribosomal protein S28.
    
   0.706
imp3
IMP U3 small nucleolar ribonucleoprotein 3.
   
 
 0.686
rps8
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
   0.682
rps3a
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
    
 
 0.675
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
   0.673
rps9
Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
   
 
 0.668
rps11
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
   0.658
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.