STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
exosc5Exosome component 5. (219 aa)    
Predicted Functional Partners:
exosc8
Exosome component 8.
   
 0.999
exosc9
Exosome component 9.
   
 0.999
exosc7
Exosome component 7.
  
 0.999
exosc4
Exosome component 4.
   
0.999
LOC101066313
Exosome component 3.
  
 0.999
exosc6
Exosome component 6.
  
0.999
exosc1
Exosome component 1.
   
 0.999
exosc2
Exosome component 2.
   
 0.999
c1d
C1D nuclear receptor corepressor.
   
 0.997
exosc10
Exosome component 10.
   
 0.997
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.