Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101076080Clusterin; Belongs to the clusterin family. (471 aa)    
Predicted Functional Partners:
xrcc6
X-ray repair complementing defective repair in Chinese hamster cells 6.
    
 
 0.583
LOC101063214
Vitronectin a.
   
 
 0.570
apoe2
Apolipoprotein E2.
   
  
 0.558
APP
Amyloid beta precursor protein.
   
 0.493
LOC101078447
Amyloid-beta A4 protein; Functional neuronal receptor which couples to intracellular signaling pathway through the GTP-binding protein G(O); Belongs to the APP family.
   
 0.493
BDKRB2
Bradykinin receptor B2; Belongs to the G-protein coupled receptor 1 family.
      
 0.450
apoa-iv3
Uncharacterized protein.
  
 
 0.444
aplp2
Amyloid beta (A4) precursor-like protein 2.
   
 0.432
apoe1
Uncharacterized protein.
   
  
 0.430
nudcd1
Uncharacterized protein.
    
   0.429
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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