STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2TI60_TAKRUUncharacterized protein. (470 aa)    
Predicted Functional Partners:
rnf2
Ring finger protein 2.
    
 0.781
LOC101068461
Chromobox protein homolog 8-like.
    
 0.780
phc3
Uncharacterized protein.
    
 0.766
LOC101071244
Chromo domain-containing protein.
    
 0.722
cbx2
Chromobox homolog 2 (Drosophila Pc class).
    
 0.722
bmi1
Bmi1 polycomb ring finger oncogene 1a.
    
 0.705
PCGF2
Polycomb group ring finger 2.
    
 0.705
LOC101076082
Chromobox 4.
    
 0.703
LOC101075073
Chromobox homolog 4 (Pc class homolog, Drosophila).
    
 0.703
cbx6
Chromobox homolog 6a.
    
 0.662
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.