STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A29Solute carrier family 25 member 29; Belongs to the mitochondrial carrier (TC 2.A.29) family. (319 aa)    
Predicted Functional Partners:
prpf39
PRP39 pre-mRNA processing factor 39 homolog (yeast).
      
 0.683
fkbp3
Peptidylprolyl isomerase.
      
 0.633
mrpl57
Mitochondrial ribosomal protein L57.
      
 0.520
WDR25
Uncharacterized protein.
      
 0.517
LOC101062333
Si:ch211-114c17.1.
      
 0.510
Fancm
ERCC4 domain-containing protein.
      
 0.481
mrps21
Mitochondrial ribosomal protein S21.
      
 0.440
begain
Uncharacterized protein.
      
 0.427
LOC101068631
WD repeat domain 20b.
      
 0.426
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
      
 0.425
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.