STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
brpf1Uncharacterized protein. (1281 aa)    
Predicted Functional Partners:
kat6a
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.914
meaf6
MYST/Esa1-associated factor 6.
    
 0.851
ing5
Inhibitor of growth family, member 5a.
    
 0.720
kat6b
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.714
foxd3
Forkhead box D3.
      
 0.712
LOC101073735
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.696
kat7
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.696
kat5
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.696
ing4
Inhibitor of growth protein.
    
 0.642
ENSTRUP00000086668
Inhibitor of growth family, member 4.
    
 0.642
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.