STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cep350Centrosomal protein 350. (3058 aa)    
Predicted Functional Partners:
H2SK46_TAKRU
FOP_dimer domain-containing protein.
    
 
 0.971
cep19
Centrosomal protein 19.
    
 
 0.917
ppp2r3c
Protein phosphatase 2, regulatory subunit B'', gamma.
    
   0.909
smg1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.
   
 
 0.824
rabl2b
RAB, member of RAS oncogene family-like 2.
    
 0.804
bdp1
SANT domain-containing protein.
   
    0.778
xrn1
5'-3' exoribonuclease 1.
   
   0.765
LOC101063900
Sodium channel and clathrin linker 1.
    
 
 0.747
ppp2ca
Serine/threonine-protein phosphatase.
    
  0.746
ppp2cb
Serine/threonine-protein phosphatase.
    
  0.746
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.