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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cep350Centrosomal protein 350. (3058 aa)    
Predicted Functional Partners:
H2SK46_TAKRU
FOP_dimer domain-containing protein.
    
 
 0.903
cep19
Centrosomal protein 19.
    
 
 0.690
smg1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.
   
 
 0.667
xrn1
5'-3' exoribonuclease 1.
   
   0.654
bdp1
SANT domain-containing protein.
   
    0.642
phf3
PHD finger protein 3.
   
    0.632
birc6
Baculoviral IAP repeat containing 6.
  
 0.591
cep89
Centrosomal protein of 89 kDa isoform X1.
      
 0.582
plk4
Polo-like kinase 4 (Drosophila).
    
 0.563
fopnl
Fgfr1op N-terminal like.
      
 0.547
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.