STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubac2UBA domain containing 2. (353 aa)    
Predicted Functional Partners:
faf2
Fas associated factor family member 2.
    
 
 0.964
ufd1
Ubiquitin recognition factor in ER associated degradation 1.
    
 
 0.932
faf1
Fas (TNFRSF6) associated factor 1.
    
 
 0.909
nploc4
NPL4 homolog, ubiquitin recognition factor.
    
 
 0.747
FAAP100
Uncharacterized protein.
    
 
 0.747
syvn1
Synovial apoptosis inhibitor 1, synoviolin.
    
 
 0.664
amfr
Autocrine motility factor receptor b.
    
 
 0.664
emc1
ER membrane protein complex subunit 1.
    
 
 0.650
emc3
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
    
 
 0.622
ak9
Adenylate kinase 9.
      
 0.589
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.