STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101067486Uncharacterized protein. (456 aa)    
Predicted Functional Partners:
ppargc1a
Peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X1.
   
 0.863
LOC101070632
Peroxisome proliferator-activated receptor gamma coactivator 1-beta isoform X1.
    
 0.824
ENSTRUP00000077588
NRIP1_repr_2 domain-containing protein.
    
 0.790
LOC101074260
POU domain protein.
    
 0.750
esrra
Estrogen-related receptor alpha.
    
   0.733
LOC101061639
NR LBD domain-containing protein.
    
 0.711
NR0B1
Nuclear receptor subfamily 0 group B member 1.
    
 0.711
slirp
SRA stem-loop interacting RNA binding protein.
    
 
 0.624
LOC101072612
Cytochrome P450, family 26, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family.
    
 0.596
LOC101063690
Anti-dorsalizing morphogenic protein.
     
 0.591
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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