Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
LOC101064892SRY-box transcription factor 9b. (484 aa)    
Predicted Functional Partners:
runx2
Runt-related transcription factor.
   
 0.832
dmrt1
DM domain-containing protein.
    
 0.827
amh
TGF_BETA_2 domain-containing protein.
    
 0.727
gata4
GATA binding protein 4.
    
 0.703
amhr2
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.676
wnt4
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
   
 0.662
pfcyp19a
Uncharacterized protein; Belongs to the cytochrome P450 family.
     
 0.662
egr2
Early growth response 2b.
    
 0.654
LOC101064242
R-spondin 1.
    
 
 0.653
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.649
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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