STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101072635Uncharacterized protein. (576 aa)    
Predicted Functional Partners:
slc22a18
Solute carrier family 22 member 18.
   
  
 0.529
ints9
Integrator complex subunit 9.
    
 0.526
ints1
Integrator complex subunit 1.
    
 0.517
ints11
Integrator complex subunit 11.
    
 0.509
LOC101078519
Taxilin beta b.
      
 0.506
ints4
Integrator complex subunit 4.
    
 0.502
ints7
Integrator complex subunit 7.
    
 0.496
ints3
Si:dkey-27c15.3.
    
 0.495
ints13
Integrator complex subunit 13.
    
 0.494
SV2A
Synaptic vesicle glycoprotein 2A.
  
    0.460
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.