Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101067677Transmembrane protein 184bb. (417 aa)    
Predicted Functional Partners:
kctd14
Potassium channel tetramerization domain containing 14.
      
 0.516
LOC101076890
Uncharacterized protein.
    
   0.461
gabarap
GABA(A) receptor-associated protein b.
    
   0.461
GABARAPL2
GABA(A) receptor-associated protein like 2.
    
   0.461
H2SX87_TAKRU
Sprouty RTK signaling antagonist 2.
    
 
 0.451
klhdc8b
Kelch domain containing 8B.
      
 0.443
LAPTM4B
Lysosomal protein transmembrane 4 beta.
   
 
 0.439
LOC101069529
Lysosomal protein transmembrane 4 beta.
   
 
 0.439
tmem115
Transmembrane protein 115.
      
 0.428
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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