Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
tmem62Transmembrane protein 62. (647 aa)    
Predicted Functional Partners:
Ccndbp1
Cyclin-D1-binding protein 1 isoform X1.
    
 0.721
thoc6
THO complex 6.
      
 0.628
ENSTRUP00000031770
annotation not available
      
 0.614
tmem164
Transmembrane protein 164.
      
 0.516
skil
SKI-like proto-oncogene a.
      
 0.489
tmem131l
Transmembrane protein 131-like isoform X2.
      
 0.473
sarnp
SAP domain-containing protein.
      
 0.438
ppp2r3c
Protein phosphatase 2, regulatory subunit B'', gamma.
      
 0.432
fer
Tyrosine-protein kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family. Fes/fps subfamily.
    
 0.410
fes
Tyrosine-protein kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family. Fes/fps subfamily.
    
 0.410
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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