STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scpp1SCPP1. (214 aa)    
Predicted Functional Partners:
scpp5
SCPP5.
      
 0.866
scpp2
Uncharacterized protein.
      
 0.792
oca2
Oculocutaneous albinism II.
      
 0.647
LOC445896
Uncharacterized protein.
      
 0.584
LOC101073644
Secreted phosphoprotein 1.
      
 0.566
scpp4
Uncharacterized protein.
      
 0.531
scpp3b
SCPP3B.
      
 0.531
sparc
SPARC.
      
 0.509
fgf5
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
      
 0.464
edar
Ectodysplasin A receptor.
      
 0.462
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.