STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101062602FRA10A associated CGG repeat 1. (325 aa)    
Predicted Functional Partners:
cwc27
CWC27 spliceosome associated cyclophilin.
   
   0.589
engase
Endo-beta-N-acetylglucosaminidase.
      
 0.566
ess2
Ess-2 splicing factor homolog.
    
 
 0.541
cherp
Calcium homeostasis endoplasmic reticulum protein.
    
 
 0.493
ik
IK cytokine.
   
   0.482
sf3b2
Splicing factor 3b, subunit 2.
    
   0.468
mettl3
Methyltransferase like 3; Belongs to the MT-A70-like family.
      
 0.457
zrsr2
U2 small nuclear ribonucleoprotein auxiliary factor subunit-related protein.
   
 
 0.440
ENSTRUP00000050427
Uncharacterized protein.
    
  0.421
ENSTRUP00000081471
Serine/threonine-protein kinase WNK2-like.
    
  0.421
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.