STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC445896Uncharacterized protein. (646 aa)    
Predicted Functional Partners:
lum
Lumican.
   
  
 0.881
LOC101063377
Decorin; May affect the rate of fibrils formation.
   
  
 0.731
LOC101073644
Secreted phosphoprotein 1.
   
  
 0.643
fam20a
FAM20A.
     
 0.641
LOC101062040
Stabilin 1.
   
 
 0.600
ENSTRUP00000069727
annotation not available
   
 
 0.600
scpp1
SCPP1.
      
 0.584
scpp2
Uncharacterized protein.
      
 0.572
scpp5
SCPP5.
      
 0.536
vcam1
Ig-like domain-containing protein.
   
  
 0.510
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.