STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC445896Uncharacterized protein. (646 aa)    
Predicted Functional Partners:
lum
Lumican.
   
 
 0.869
LOC101063377
Decorin; May affect the rate of fibrils formation.
   
 
 0.853
serpinh1
Serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b; Belongs to the serpin family.
   
 
 0.736
LOC101073644
Secreted phosphoprotein 1.
      
 0.705
LOC101062040
Stabilin 1.
     
 0.647
ENSTRUP00000069727
annotation not available
     
 0.647
fam20a
FAM20A.
     
 0.626
scpp1
SCPP1.
      
 0.571
H2RM54_TAKRU
Vitellogenin domain-containing protein.
   
 
 0.523
ENSTRUP00000074430
annotation not available
   
 
 0.523
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (14%) [HD]