STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mppe1Metallophosphoesterase 1. (357 aa)    
Predicted Functional Partners:
cdc27
Cell division cycle 27.
      
 0.654
pgap3
Post-GPI attachment to proteins factor 3; Involved in the lipid remodeling steps of GPI-anchor maturation; Belongs to the PGAP3 family.
    
 
 0.630
ENSTRUP00000077397
post-GPI attachment to proteins phospholipase 3.
    
 
 0.630
pigb
Mannosyltransferase.
    
 
 0.620
pigg
Phosphatidylinositol glycan anchor biosynthesis class G.
    
 
 0.601
pigc
Phosphatidylinositol glycan anchor biosynthesis, class C.
      
 0.584
pigh
Phosphatidylinositol glycan anchor biosynthesis, class H.
    
 
 0.571
mrpl40
Mitochondrial ribosomal protein L40.
      
 0.566
pigk
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
      
 0.566
pgap2
Post-GPI attachment to proteins 2.
    
 
 0.559
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.