STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
adam19ADAM metallopeptidase domain 19b. (945 aa)    
Predicted Functional Partners:
thg1l
tRNA(His) guanylyltransferase; Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage.
      
 0.803
znf511
Zinc finger protein 511.
      
 0.676
sepsecs
LRRCT domain-containing protein.
     
 0.489
HYAL2
Hyaluronidase.
   
 
 0.465
HYAL2-2
Hyaluronidase.
   
 
 0.465
LOC101072113
Hyaluronidase.
   
 
 0.465
SH3PXD2A
SH3 and PX domains 2A.
    
 0.462
LOC101063901
SH3 and PX domains 2Aa.
    
 0.462
sh3pxd2b
SH3 and PX domains 2B.
    
 0.452
LOC101065506
Chitin-binding type-2 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
     
 0.435
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.