LOC101067257 protein (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC101067257

Uncharacterized protein. (375 aa)

Predicted Functional Partners:

mtor

0.987

lamtor5

0.981

lamtor2

0.981

flcn

0.980

lamtor3

0.979

anapc15

0.978

lamtor4

0.976

mlst8

0.974

LOC101067319

0.960

fnip1

0.941

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101067257	LOC101067319	ENSTRUP00000024819	ENSTRUP00000080571	Uncharacterized protein.	Uncharacterized protein.	0.960
LOC101067257	anapc15	ENSTRUP00000024819	ENSTRUP00000083237	Uncharacterized protein.	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.	0.978
LOC101067257	flcn	ENSTRUP00000024819	ENSTRUP00000069542	Uncharacterized protein.	Folliculin.	0.980
LOC101067257	fnip1	ENSTRUP00000024819	ENSTRUP00000013711	Uncharacterized protein.	Folliculin interacting protein 1.	0.941
LOC101067257	lamtor2	ENSTRUP00000024819	ENSTRUP00000067569	Uncharacterized protein.	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.	0.981
LOC101067257	lamtor3	ENSTRUP00000024819	ENSTRUP00000009621	Uncharacterized protein.	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3.	0.979
LOC101067257	lamtor4	ENSTRUP00000024819	ENSTRUP00000001432	Uncharacterized protein.	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 4.	0.976
LOC101067257	lamtor5	ENSTRUP00000024819	ENSTRUP00000050288	Uncharacterized protein.	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.	0.981
LOC101067257	mlst8	ENSTRUP00000024819	ENSTRUP00000043272	Uncharacterized protein.	MTOR associated protein, LST8 homolog (S. cerevisiae).	0.974
LOC101067257	mtor	ENSTRUP00000024819	ENSTRUP00000022706	Uncharacterized protein.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.987
LOC101067319	LOC101067257	ENSTRUP00000080571	ENSTRUP00000024819	Uncharacterized protein.	Uncharacterized protein.	0.960
LOC101067319	anapc15	ENSTRUP00000080571	ENSTRUP00000083237	Uncharacterized protein.	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.	0.587
LOC101067319	lamtor2	ENSTRUP00000080571	ENSTRUP00000067569	Uncharacterized protein.	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.	0.580
LOC101067319	lamtor3	ENSTRUP00000080571	ENSTRUP00000009621	Uncharacterized protein.	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3.	0.566
LOC101067319	lamtor4	ENSTRUP00000080571	ENSTRUP00000001432	Uncharacterized protein.	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 4.	0.472
LOC101067319	lamtor5	ENSTRUP00000080571	ENSTRUP00000050288	Uncharacterized protein.	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.	0.604
LOC101067319	mlst8	ENSTRUP00000080571	ENSTRUP00000043272	Uncharacterized protein.	MTOR associated protein, LST8 homolog (S. cerevisiae).	0.987
LOC101067319	mtor	ENSTRUP00000080571	ENSTRUP00000022706	Uncharacterized protein.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.996
anapc15	LOC101067257	ENSTRUP00000083237	ENSTRUP00000024819	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.	Uncharacterized protein.	0.978
anapc15	LOC101067319	ENSTRUP00000083237	ENSTRUP00000080571	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.	Uncharacterized protein.	0.587