STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
phox2aPaired like homeobox 2A. (299 aa)    
Predicted Functional Partners:
phox2b
Paired like homeobox 2B.
   
 
 0.841
barx2
BARX homeobox 2.
   
 
0.711
KIF21A
Kinesin family member 21A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.651
H2TWG6_TAKRU
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.651
LOC101077779
Uncharacterized protein.
      
 0.622
Prr16
Protein Largen.
      
 0.586
dbh
Dopamine beta-hydroxylase (dopamine beta-monooxygenase).
   
 
 0.500
LOC101072267
Monooxygenase, DBH-like 1, like.
   
 
 0.500
exd1
Uncharacterized protein.
      
 0.493
Fash1
Achaete-scute family bHLH transcription factor 1b.
   
 
 0.491
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.