Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
drg1Developmentally regulated GTP binding protein 1. (367 aa)    
Predicted Functional Partners:
zc3h15
Zinc finger CCCH-type containing 15.
   
 0.999
rwdd1
RWD domain containing 1.
   
 0.985
knop1
Lysine-rich nucleolar protein 1.
   
  
 0.892
drg2
Developmentally regulated GTP binding protein 2.
   
   0.882
rell1
RELT like 1.
   
 0.862
rwdd4
RWD domain containing 4.
   
 0.862
lrrc41
Uncharacterized protein.
   
   0.860
tubd1
Tubulin, delta 1; Belongs to the tubulin family.
   
  
 0.823
Ntmt1
N-terminal Xaa-Pro-Lys N-methyltransferase 1.
   
   0.821
rpl8
Ribosomal protein L8.
   
 
 0.811
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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