Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101074727Solute carrier family 7 member 3a. (647 aa)    
Predicted Functional Partners:
rwdd4
RWD domain containing 4.
      
 0.618
LOC101070269
Zmp:0000001267.
  
 
 0.566
coq7
5-demethoxyubiquinone hydroxylase, mitochondrial; Catalyzes the hydroxylation of 2-polyprenyl-3-methyl-6- methoxy-1,4-benzoquinol (DMQH2) during ubiquinone biosynthesis. Has also a structural role in the COQ enzyme complex, stabilizing other COQ polypeptides. Involved in lifespan determination in a ubiquinone- independent manner.
     
 0.525
tmem268
Uncharacterized protein.
      
 0.519
SLC16A2
Solute carrier family 16 member 2.
      
 0.514
slc16a10
Solute carrier family 16 member 10.
      
 0.514
LOC101078712
Coiled-coil domain containing 114.
     
 0.509
ENSTRUP00000028145
Zmp:0000001267.
  
 
 0.478
plpp4
Phospholipid phosphatase 4.
   
  
 0.469
LOC101065096
Phospholipid phosphatase 5.
   
  
 0.469
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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