STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101074727Solute carrier family 7 member 3a. (647 aa)    
Predicted Functional Partners:
LOC101070269
Zmp:0000001267.
  
 
 0.497
slc3a1
Solute carrier family 3 member 1.
   
 0.469
LOC101070290
4F2 cell-surface antigen heavy chain-like isoform X1.
   
 0.461
slc3a2
Solute carrier family 3 member 2a.
   
 0.461
orc4
Origin recognition complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family.
      
 0.435
kiaa0513
Zgc:91860.
   
 0.423
alkbh3
AlkB homolog 3, alpha-ketoglutarate-dependent dioxygenase.
   
 0.423
alkbh2
AlkB homolog 2, alpha-ketoglutarate-dependent dioxygenase.
   
 0.423
LOC101071451
Caudal type homeobox 4.
   
  
 0.408
SLC16A2
Solute carrier family 16 member 2.
      
 0.402
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.