close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101061288Protein phosphatase, Mg2+/Mn2+ dependent, 1Db. (559 aa)    
Predicted Functional Partners:
ppm1d
Protein phosphatase, Mg2+/Mn2+ dependent, 1Da.
  
  
 
0.903
cbfb
Core-binding factor subunit beta.
     
 0.597
chek2
Checkpoint kinase 2.
    
 
 0.589
tab2
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
    
 0.518
tab3
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
    
 0.518
runx3
Runt-related transcription factor.
    
 0.495
runx2
Runt-related transcription factor.
    
 0.495
runx1
Runt-related transcription factor.
    
 0.495
bckdhb
Branched chain keto acid dehydrogenase E1 subunit beta.
   
 0.491
traf7
TNF receptor-associated factor 7.
   
 0.487
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.