STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC105416279SEFIR domain-containing protein. (688 aa)    
Predicted Functional Partners:
il17r
Interleukin 17 receptor A1a.
    
 0.995
LOC105417509
Interleukin-17A/F-3.
    
 0.988
LOC101070365
Uncharacterized protein.
  
 
 0.971
IL-17A/F-1
Interleukin-17A/F-1.
    
 0.964
LOC105417827
Interleukin 17 receptor C.
     
 
0.900
tmco1
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling.
      
 0.788
IL17RD
IL17R_D_N domain-containing protein.
    
 0.752
LOC101079180
Interleukin-17 receptor D-like isoform X1.
    
 0.752
LOC105419331
Si:ch211-207e14.4.
    
 0.752
fahd1
Fumarylacetoacetate hydrolase domain containing 1.
      
 0.623
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.