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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2TK13_TAKRUPotassium channel tetramerisation domain containing 12b. (285 aa)    
Predicted Functional Partners:
cul3
Cullin 3a; Belongs to the cullin family.
    
 0.607
commd1
Copper metabolism (Murr1) domain containing 1.
     
 0.450
tfap2d
Transcription factor AP-2 delta (activating enhancer binding protein 2 delta).
   
 0.423
kctd7
Potassium channel tetramerization domain containing 7.
     
0.420
tfap2c
Transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma).
   
 0.418
tfap2a
Transcription factor AP-2 alpha.
   
 0.418
tfap2e
Transcription factor AP-2 epsilon.
   
 0.418
LOC101069802
Transcription factor AP-2 beta.
   
 0.418
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.