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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kcnj8Potassium inwardly-rectifying channel, subfamily J, member 8. (422 aa)    
Predicted Functional Partners:
abcc9
ATP-binding cassette, sub-family C (CFTR/MRP), member 9.
 
 
 0.953
LOC101070245
Zgc:171558.
   
 
 0.593
LOC101068679
Rap guanine nucleotide exchange factor (GEF) 3.
     
 0.569
SLC12A6
Solute carrier family 12 member 6.
      
 0.524
LOC101067414
Solute carrier family 12 member 7a.
      
 0.524
abcc5
Si:ch211-221f10.2.
   
 0.483
abcc12
Uncharacterized protein.
   
 0.483
LOC101074266
ATP-binding cassette, sub-family C (CFTR/MRP), member 4.
   
 0.477
ABCC4
Uncharacterized protein.
   
 0.477
slc12a2
Solute carrier family 12 member 2.
   
  
 0.476
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.