Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CLPBClpB homolog, mitochondrial AAA ATPase chaperonin. (691 aa)    
Predicted Functional Partners:
grpel1
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 
 0.963
clpp
ATP-dependent Clp protease proteolytic subunit.
  
 
 0.955
stip1
Stress-induced phosphoprotein 1.
   
 
 0.908
clpx
Caseinolytic mitochondrial matrix peptidase chaperone subunit b.
  
 
 0.861
hspe1
Heat shock 10 protein 1; Belongs to the GroES chaperonin family.
  
 
 0.848
ahsa1
AHA1, activator of heat shock protein ATPase homolog 1b.
   
 
 0.802
LOC101070860
TSC complex subunit 1b.
  
 
 0.801
H2UCW4_TAKRU
TSC complex subunit 1.
  
 
 0.801
LOC101076976
Heat shock protein 90, alpha (cytosolic), class B member 1.
  
 
 0.801
LOC101069079
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
  
 
 0.801
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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