STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
als2Alsin Rho guanine nucleotide exchange factor ALS2 b. (1673 aa)    
Predicted Functional Partners:
LOC101066679
Uncharacterized protein.
   
 0.943
LOC101073601
Uncharacterized protein.
   
 0.943
LOC101069905
RAB guanine nucleotide exchange factor (GEF) 1, like.
   
 0.943
LOC101077614
TPR_REGION domain-containing protein.
   
 0.793
LOC115246522
GTPase activating protein and VPS9 domains 1.
   
 0.711
zfand4
Zinc finger, AN1-type domain 4.
    
 0.696
LOC105417863
Uncharacterized protein.
    
 0.625
RSPH6A
Radial spoke head protein 4 homolog A-like.
    
 
 0.608
LOC101061393
Radial spoke head component 4A.
    
 
 0.608
xpo5
Exportin 5.
    
 
 0.608
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.