STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
coblCordon-bleu WH2 repeat protein. (1272 aa)    
Predicted Functional Partners:
dbx1
Developing brain homeobox 1a.
      
 0.627
LOC101073512
Paired box 2a.
      
 0.520
chpt1
Choline phosphotransferase 1.
      
 0.505
thrap3
Thyroid hormone receptor associated protein 3b.
  
 
 0.481
pax8
Paired box 8.
      
 0.450
armh4
Armadillo-like helical domain-containing protein 4.
  
     0.438
setbp1
SET binding protein 1.
  
 
 0.433
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.428
LOC101064039
A kinase (PRKA) anchor protein 12b.
     
 0.420
JMY
Junction mediating and regulatory protein, p53 cofactor.
    
 0.419
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.