Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
H2TKA6_TAKRUT-box transcription factor 2a. (576 aa)    
Predicted Functional Partners:
LOC101078807
SIX homeobox 7.
    
 
 0.700
msgn1
Mesogenin 1.
   
 0.642
LOC105417312
BHLH domain-containing protein.
    
 0.606
shisa2
Shisa family member 2b.
      
 0.572
LOC101078705
LIM homeobox 1b.
    
 0.565
LOC101073544
Retinal homeobox gene 1.
    
 0.471
aifm1
Apoptosis inducing factor mitochondrion associated 1.
      
 0.457
lhx5
LIM homeobox 5.
    
 0.456
grk7
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
      
 0.432
LOC101076680
RAR-related orphan receptor C b.
      
 0.430
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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