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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2TKA6_TAKRUT-box transcription factor 2a. (576 aa)    
Predicted Functional Partners:
msgn1
Mesogenin 1.
   
 0.578
LOC101078807
SIX homeobox 7.
      
 0.569
shisa2
Shisa family member 2b.
      
 0.530
LOC101078705
LIM homeobox 1b.
    
 0.488
LOC101073544
Retinal homeobox gene 1.
    
 0.478
lhx5
LIM homeobox 5.
    
 0.456
aifm1
Apoptosis inducing factor mitochondrion associated 1.
      
 0.451
grk7
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
      
 0.422
LOC101076680
RAR-related orphan receptor C b.
      
 0.404
meox1
Mesenchyme homeobox 1.
    
 
 0.400
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.