Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101062326KH domain containing, RNA binding, signal transduction associated 1b. (360 aa)    
Predicted Functional Partners:
dhx9
DRBM domain-containing protein.
   
 
 0.684
hnrnpc
RRM domain-containing protein.
   
 
 0.667
LOC101061819
Tyrosine-protein kinase.
    
 0.664
ENSTRUP00000082110
annotation not available
    
 0.664
rasa1
RAS p21 protein activator (GTPase activating protein) 1a.
    
 
 0.652
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 
 0.631
LOC101076991
Heterogeneous nuclear ribonucleoprotein K, like.
   
 
 0.631
LOC101073984
CREB binding protein a.
    
   0.622
LOC101079928
Tyrosine-protein kinase.
    
 0.588
fyn
Tyrosine-protein kinase.
    
 0.588
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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