Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101062208Voltage-dependent calcium channel beta subunit-associated regulatory protein-like. (939 aa)    
Predicted Functional Partners:
clrn3
Clarin 3.
      
 0.638
GHITM
Growth hormone inducible transmembrane protein; Belongs to the BI1 family.
      
 0.608
shoc2
SHOC2 leucine rich repeat scaffold protein.
    
   0.585
snap47
Synaptosome associated protein 47.
   
  
 0.507
borcs6
Si:dkey-72l14.4.
      
 0.505
cplx3
Uncharacterized protein.
      
 0.476
RIMS1
Regulating synaptic membrane exocytosis protein 1-like isoform X1.
   
  
 0.428
cacnb4.1
Voltage-gated calcium channel beta 4.1 subunit transcript variant 1.
   
   0.411
cacnb4
Voltage-gated calcium channel beta 4.2 subunit transcript variant 2.
   
   0.411
ENSTRUP00000001187
Calcium channel, voltage-dependent, beta 3b.
    
   0.400
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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