Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ankrd10Ankyrin repeat domain 10b. (347 aa)    
Predicted Functional Partners:
ten1
TEN1 subunit of CST complex.
      
 0.730
UBE3A
Ubiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates.
    
 
 0.713
LOC101063160
Ubiquitin protein ligase E3A.
    
 
 0.698
ddx55
RNA helicase.
   
 0.546
ddx10
RNA helicase.
    
 0.526
ing1
Inhibitor of growth protein.
    
 
 0.519
cars2
Cysteinyl-tRNA synthetase 2, mitochondrial.
    
 
 0.516
pms1
PMS1 homolog 1, mismatch repair system component.
     
 0.514
ddx18
RNA helicase.
    
 0.513
hsf2bp
Heat shock transcription factor 2 binding protein.
      
 0.512
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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