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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101078723Bone morphogenetic protein/retinoic acid inducible neural-specific 3b. (790 aa)    
Predicted Functional Partners:
LOC101074094
Neurexophilin; May be signaling molecules that resemble neuropeptides.
  
    0.512
LOC101074094-2
Neurexophilin-1-like.
  
    0.512
nxph2
Neurexophilin; May be signaling molecules that resemble neuropeptides.
  
    0.494
NXPH3
Neurexophilin 3.
  
    0.459
lgi1a
LRRCT domain-containing protein.
  
    0.420
mc4r
Melanocortin 4 receptor.
  
     0.417
LOC101079805
Uncharacterized protein; Belongs to the beta/gamma-crystallin family.
  
     0.414
ENSTRUP00000031649
Gamma-crystallin M3-like.
  
     0.412
LOC101061022
Uncharacterized protein; Belongs to the beta/gamma-crystallin family.
  
     0.410
lgi1
LGI1b.
  
    0.407
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.