Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
LOC101076529RAB7a, member RAS oncogene family. (207 aa)    
Predicted Functional Partners:
ccz1
CCZ1 homolog, vacuolar protein trafficking and biogenesis associated.
    
 0.989
plekhm1
RUN domain-containing protein.
    
 0.987
LOC101062767
Rab interacting lysosomal protein.
    
 0.983
vps11
Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family.
    
 0.978
mon1a
Protein SAND; Belongs to the MON1/SAND family.
    
 0.976
LOC101075761
MON1 secretory trafficking family member Bb.
    
 0.976
tbc1d15
TBC1 domain family, member 15.
    
 0.969
vps39
VPS39 subunit of HOPS complex.
    
 0.961
vps41
VPS41 subunit of HOPS complex.
    
 0.960
vps18
VPS18 core subunit of CORVET and HOPS complexes.
    
 0.960
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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