LOC101071349 protein (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

LOC101071349

Chemokine (C-C motif) receptor 8.1; Belongs to the G-protein coupled receptor 1 family. (383 aa)

Predicted Functional Partners:

H2TKZ1_TAKRU

0.900

LOC101061903

0.900

LOC105417929

0.900

LOC101075532

0.701

ENSTRUP00000053085

0.701

LOC101070147

0.515

nek2

0.494

LOC101075221

0.483

LOC101065739

0.453

cxcl12

0.453

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSTRUP00000053085	H2TKZ1_TAKRU	ENSTRUP00000053085	ENSTRUP00000025346	Purine-rich element binding protein Aa.	Si:cabz01093077.1; Belongs to the G-protein coupled receptor 1 family.	0.701
ENSTRUP00000053085	LOC101061903	ENSTRUP00000053085	ENSTRUP00000025756	Purine-rich element binding protein Aa.	Chemokine (C-C motif) receptor 12a; Belongs to the G-protein coupled receptor 1 family.	0.479
ENSTRUP00000053085	LOC101071349	ENSTRUP00000053085	ENSTRUP00000025367	Purine-rich element binding protein Aa.	Chemokine (C-C motif) receptor 8.1; Belongs to the G-protein coupled receptor 1 family.	0.701
H2TKZ1_TAKRU	ENSTRUP00000053085	ENSTRUP00000025346	ENSTRUP00000053085	Si:cabz01093077.1; Belongs to the G-protein coupled receptor 1 family.	Purine-rich element binding protein Aa.	0.701
H2TKZ1_TAKRU	LOC101061903	ENSTRUP00000025346	ENSTRUP00000025756	Si:cabz01093077.1; Belongs to the G-protein coupled receptor 1 family.	Chemokine (C-C motif) receptor 12a; Belongs to the G-protein coupled receptor 1 family.	0.900
H2TKZ1_TAKRU	LOC101065739	ENSTRUP00000025346	ENSTRUP00000049008	Si:cabz01093077.1; Belongs to the G-protein coupled receptor 1 family.	Chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1).	0.453
H2TKZ1_TAKRU	LOC101070147	ENSTRUP00000025346	ENSTRUP00000032986	Si:cabz01093077.1; Belongs to the G-protein coupled receptor 1 family.	Opsin 1 (cone pigments), short-wave-sensitive 2.	0.515
H2TKZ1_TAKRU	LOC101071349	ENSTRUP00000025346	ENSTRUP00000025367	Si:cabz01093077.1; Belongs to the G-protein coupled receptor 1 family.	Chemokine (C-C motif) receptor 8.1; Belongs to the G-protein coupled receptor 1 family.	0.900
H2TKZ1_TAKRU	LOC101075221	ENSTRUP00000025346	ENSTRUP00000002471	Si:cabz01093077.1; Belongs to the G-protein coupled receptor 1 family.	Anaphase promoting complex subunit 1.	0.483
H2TKZ1_TAKRU	LOC101075532	ENSTRUP00000025346	ENSTRUP00000016680	Si:cabz01093077.1; Belongs to the G-protein coupled receptor 1 family.	Purine-rich element binding protein Ab.	0.701
H2TKZ1_TAKRU	LOC105417929	ENSTRUP00000025346	ENSTRUP00000052099	Si:cabz01093077.1; Belongs to the G-protein coupled receptor 1 family.	SCY domain-containing protein.	0.900
H2TKZ1_TAKRU	cxcl12	ENSTRUP00000025346	ENSTRUP00000074506	Si:cabz01093077.1; Belongs to the G-protein coupled receptor 1 family.	Chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family.	0.453
H2TKZ1_TAKRU	nek2	ENSTRUP00000025346	ENSTRUP00000046093	Si:cabz01093077.1; Belongs to the G-protein coupled receptor 1 family.	NIMA-related kinase 2.	0.494
LOC101061903	ENSTRUP00000053085	ENSTRUP00000025756	ENSTRUP00000053085	Chemokine (C-C motif) receptor 12a; Belongs to the G-protein coupled receptor 1 family.	Purine-rich element binding protein Aa.	0.479
LOC101061903	H2TKZ1_TAKRU	ENSTRUP00000025756	ENSTRUP00000025346	Chemokine (C-C motif) receptor 12a; Belongs to the G-protein coupled receptor 1 family.	Si:cabz01093077.1; Belongs to the G-protein coupled receptor 1 family.	0.900
LOC101061903	LOC101071349	ENSTRUP00000025756	ENSTRUP00000025367	Chemokine (C-C motif) receptor 12a; Belongs to the G-protein coupled receptor 1 family.	Chemokine (C-C motif) receptor 8.1; Belongs to the G-protein coupled receptor 1 family.	0.900
LOC101061903	LOC101075532	ENSTRUP00000025756	ENSTRUP00000016680	Chemokine (C-C motif) receptor 12a; Belongs to the G-protein coupled receptor 1 family.	Purine-rich element binding protein Ab.	0.479
LOC101061903	LOC105417929	ENSTRUP00000025756	ENSTRUP00000052099	Chemokine (C-C motif) receptor 12a; Belongs to the G-protein coupled receptor 1 family.	SCY domain-containing protein.	0.900
LOC101065739	H2TKZ1_TAKRU	ENSTRUP00000049008	ENSTRUP00000025346	Chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1).	Si:cabz01093077.1; Belongs to the G-protein coupled receptor 1 family.	0.453
LOC101065739	LOC101071349	ENSTRUP00000049008	ENSTRUP00000025367	Chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1).	Chemokine (C-C motif) receptor 8.1; Belongs to the G-protein coupled receptor 1 family.	0.453