Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
lmtk2Lemur tyrosine kinase 2. (1487 aa)    
Predicted Functional Partners:
grxcr1
Glutaredoxin and cysteine rich domain containing 1 a.
      
 0.542
scf
Uncharacterized protein.
    
 0.525
ENSTRUP00000040395
annotation not available
    
 
 0.514
LOC101064018
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.514
LOC101069117
Serine/threonine-protein phosphatase alpha-2 isoform-like.
    
 
 0.514
slc30a9
Solute carrier family 30 member 9.
      
 0.476
OSBPL10
Oxysterol-binding protein; Belongs to the OSBP family.
      
 0.469
TP53I3
Tumor protein p53 inducible protein 3.
      
 0.439
miga2
Mitoguardin 2.
      
 0.437
il34
Uncharacterized protein.
   
  0.431
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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