Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
slc45a3Zgc:77158. (567 aa)    
Predicted Functional Partners:
phax
Phosphorylated adaptor for RNA export.
    
   0.745
ENSTRUP00000067173
G protein-activated inward rectifier potassium channel 3-like.
      
 0.654
pstpip2
Proline-serine-threonine phosphatase interacting protein 2.
      
 0.497
pm20d1
Peptidase M20 domain containing 1, tandem duplicate 2.
      
 0.497
atp5pb
ATP synthase peripheral stalk-membrane subunit b.
      
 0.476
ddrgk1
Uncharacterized protein.
      
 0.469
srrm1
Serine/arginine repetitive matrix 1.
   
  
 0.449
elk4
ETS transcription factor ELK4.
      
 0.445
etv1
Ets variant 1.
   
  
 0.441
atad2b
ATPase family AAA domain containing 2B.
      
 0.431
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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