STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
morn3MORN repeat containing 3. (286 aa)    
Predicted Functional Partners:
morn5
MORN repeat containing 5.
   
 
 0.953
rsph14
Uncharacterized protein.
   
 
 0.914
LOC101077748
Cytochrome b5 domain containing 1; Belongs to the cytochrome b5 family.
    
 
 0.893
LOC101064816
Radial spoke head component 1.
  
 
  
0.890
iqub
IQ motif and ubiquitin domain containing.
   
 
 0.880
rsph3
Radial spoke head 3.
   
 
 0.875
cfap52
Cilia and flagella associated protein 52.
    
 0.865
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
    
 
 0.843
cfap73
Uncharacterized protein.
   
 
 0.838
pacrg
PARK2 co-regulated.
   
 
 0.799
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.