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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kcne4Potassium voltage-gated channel, Isk-related family, member 4. (235 aa)    
Predicted Functional Partners:
LOC101070528
Potassium voltage-gated channel, KQT-like subfamily, member 1.1; Belongs to the potassium channel family.
    
 0.650
LOC101062402
Uncharacterized protein; Belongs to the potassium channel family.
    
 0.650
lama5
Laminin, alpha 5.
      
 0.622
lipt2
Putative lipoyltransferase 2, mitochondrial isoform X1.
      
 0.566
prim2
DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands.
      
 0.558
LOC101073201
TUB like protein 4b; Belongs to the TUB family.
      
 0.497
tulp4
TUB like protein 4a; Belongs to the TUB family.
      
 0.497
LOC101078901
Potassium voltage-gated channel, KQT-like subfamily, member 2a; Belongs to the potassium channel family.
    
 0.465
KCNQ4
Potassium voltage-gated channel subfamily Q member 4; Belongs to the potassium channel family.
    
 0.465
LOC101067198
Ion_trans domain-containing protein; Belongs to the potassium channel family.
    
 0.465
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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