Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
abhd11Abhydrolase domain containing 11. (308 aa)    
Predicted Functional Partners:
rogdi
Rogdi atypical leucine zipper.
      
 0.788
abhd6
Abhydrolase domain containing 6b.
      
 0.705
LOC101067462
Phenylalanyl-tRNA synthetase subunit alpha.
     
 0.704
abhd18
Abhydrolase domain containing 18.
      
 0.703
svop
SV2 related protein a.
      
 0.699
LOC101067185
Aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase).
   
 
 0.618
farsb
Phenylalanyl-tRNA synthetase subunit beta; Belongs to the EF-1-beta/EF-1-delta family.
  
  
 0.606
acox1
Acyl-CoA_dh_M domain-containing protein.
   
 0.600
rcc1l
RCC1 like.
   
  
 0.581
mrm1
Mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae).
    
 
 0.548
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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