Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC105416438Parvalbumin 1; Belongs to the parvalbumin family. (109 aa)    
Predicted Functional Partners:
ak9
Adenylate kinase 9.
    
 
 0.751
LOC101061845
NME/NM23 family member 8; Belongs to the NDK family.
   
 
 0.547
cask
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.540
wdr90
WD repeat domain 90.
   
 0.524
ENSTRUP00000038486
annotation not available
    
 
 0.498
ENSTRUP00000058125
Adenylate/nucleoside-diphosphate kinase.
    
 
 0.498
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
   
 0.471
lepr
Uncharacterized protein.
      
 0.430
phkg2
Phosphorylase kinase, gamma 2 (testis); Belongs to the protein kinase superfamily.
   
 0.423
phkg1
Phosphorylase kinase, gamma 1a (muscle); Belongs to the protein kinase superfamily.
   
 0.423
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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