STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101062713ArfGAP with coiled-coil, ankyrin repeat and PH domains 3b. (840 aa)    
Predicted Functional Partners:
rab35
RAB35, member RAS oncogene family b.
    
 
 0.613
LOC101066302
Si:dkey-16l2.16.
    
 
 0.613
appl2
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
   
 
0.580
appl1
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
   
 
0.580
rab11fip4
RAB11 family interacting protein 4 (class II) b.
    
 0.452
LOC101063276
RAB11 family interacting protein 4 (class II) a.
    
 0.452
rab11fip3
RAB11 family interacting protein 3 (class II).
    
 0.452
exoc5
Exocyst complex component 5.
   
 
 0.451
exoc7
Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
     
 0.449
ift27
Intraflagellar transport 27 homolog (Chlamydomonas).
    
 
 0.426
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.